Chocolate Zucchini Muffins – Gluten Free Recipe
If you’re on the hunt for a delightful treat that combines rich chocolate flavor with a sneaky serving of veggies, then these Chocolate Zucchini Muffins – Gluten Free are about to become your new favorite. Soft, moist, and irresistibly chocolatey, these muffins bring together wholesome ingredients like almond flour and shredded zucchini for a naturally gluten-free indulgence. Whether you’re baking for breakfast, snack time, or dessert, these muffins deliver all the comfort without any of the guilt.

Ingredients You’ll Need
Gathering these ingredients is a breeze, and each one plays a vital role in crafting the perfect balance of texture, taste, and nutrition. From the nutty almond flour to the subtle sweetness of maple syrup, every component is thoughtfully chosen to create muffins that are gluten free but never compromising on flavor.
- Blanched almond flour: The gluten-free base that adds a tender crumb and mild nuttiness.
- Unsweetened cocoa powder: Brings deep, rich chocolate flavor without any added sugar.
- Baking soda: Helps the muffins rise beautifully for a light texture.
- Kosher salt: Enhances the chocolate flavor and balances sweetness.
- Large egg: Binds the ingredients and provides structure.
- Maple syrup: A natural sweetener that adds warmth and moisture.
- Unsweetened applesauce: Keeps the muffins moist and adds a hint of natural sweetness.
- Creamy almond butter: Contributes richness and a delicate nutty taste.
- Non-dairy milk (almond or coconut): Adds moisture and lightness to the batter.
- Olive oil or coconut oil: Ensures tender crumb and a subtle depth of flavor.
- Vanilla extract: Boosts the overall aroma and rounds out the chocolate.
- Shredded zucchini (with extra water squeezed out): Sneaks in veggie goodness without sogginess.
- Chocolate chips: Extra melty pockets of chocolate in every bite, plus more for topping.
How to Make Chocolate Zucchini Muffins – Gluten Free
Step 1: Prepare the Oven and Zucchini
Start by preheating your oven to 400 degrees Fahrenheit and lining a 12-cup muffin pan with muffin liners. Shredding the zucchini is key—use a box grater and then squeeze out any extra water using a clean kitchen towel to avoid soggy muffins down the line.
Step 2: Mix Dry Ingredients
In a medium bowl, combine the almond flour, unsweetened cocoa powder, baking soda, and kosher salt. Mixing these together first ensures the rising agents and flavors are evenly distributed throughout the batter.
Step 3: Combine Wet Ingredients
In a separate bowl, whisk together the lightly beaten egg, maple syrup, unsweetened applesauce, creamy almond butter, non-dairy milk, olive or coconut oil, and vanilla extract until smooth and well-integrated. This wet mixture provides moisture and sweetness while keeping the muffins tender.
Step 4: Bring It All Together
Gradually mix the dry ingredients into the wet mixture, stirring gently but thoroughly. Once combined, fold in the shredded zucchini and chocolate chips. This step is where that delightful texture and surprise bursts of chocolate come to life.
Step 5: Bake to Perfection
Divide your batter evenly into the muffin liners—aim for each cup to be about three-quarters full. Bake at 400 degrees Fahrenheit for 22 to 25 minutes, or until a toothpick inserted in the center comes out with just a few moist crumbs. Let them cool slightly before diving in.
How to Serve Chocolate Zucchini Muffins – Gluten Free

Garnishes
For a finishing touch, sprinkle a few extra chocolate chips on top of the muffins right after baking so they melt slightly and create a tempting shiny glaze. A light dusting of powdered sugar or a smear of creamy almond butter also pairs beautifully.
Side Dishes
These muffins are versatile enough to pair with a warm cup of coffee or tea for a cozy morning treat, or paired with fresh fruit salad for a colorful, balanced snack. A dollop of dairy-free yogurt can lend a tangy contrast that’s delightful.
Creative Ways to Present
Looking to impress guests? Serve these Chocolate Zucchini Muffins – Gluten Free in a charming basket lined with a colorful napkin. For a brunch spread, stack them on a tiered serving tray and garnish with fresh mint leaves to add a pop of freshness.
Make Ahead and Storage
Storing Leftovers
Store any leftover muffins in an airtight container at room temperature for up to three days. To keep them fresh longer, place a sheet of parchment paper between layers to avoid sticking and preserve their tender crumb.
Freezing
These muffins freeze beautifully! Wrap each muffin individually in plastic wrap and place them in a freezer-safe bag or container. They will keep well for up to three months, making them a great make-ahead snack when time is tight.
Reheating
When you’re ready to enjoy a frozen muffin, thaw it at room temperature or warm it gently in the microwave for about 20 seconds. For a crispier topping, try a quick toast in the oven at 325 degrees Fahrenheit for 5 minutes.
FAQs
Can I substitute almond flour with another gluten-free flour?
While almond flour gives these muffins their signature moistness and nuttiness, you can experiment with other gluten-free flours like oat or coconut flour. Keep in mind that texture and moisture levels may vary, so adjustments to liquid ingredients might be necessary.
Is it necessary to squeeze out the water from the zucchini?
Yes! Removing excess moisture prevents soggy muffins and ensures a tender but structured crumb. Using a clean kitchen towel or cheesecloth to wring out the shredded zucchini works wonders.
Can I make these muffins vegan?
Absolutely. To make the Chocolate Zucchini Muffins – Gluten Free vegan, swap the egg for a flax or chia egg (1 tablespoon ground flaxseed or chia seeds mixed with 3 tablespoons water) and use a plant-based protein or nut butter to keep the texture rich.
How do these muffins taste compared to traditional chocolate muffins?
These muffins are moist with a subtle nutty undertone from the almond flour and a pleasant hint of zucchini that adds depth without overpowering the chocolate. They’re less sweet and more wholesome but just as satisfying.
Can I add nuts or dried fruits to the recipe?
Definitely! Adding chopped walnuts, pecans, or dried cherries can introduce lovely texture and flavor contrasts. Just fold them in along with the chocolate chips before baking.
Final Thoughts
Trust me, once you make these Chocolate Zucchini Muffins – Gluten Free, they’ll become an indispensable part of your baking repertoire. They’re approachable, nutritious, and truly delicious—a perfect way to enjoy dessert and veggies together. So preheat that oven and get ready for some seriously tasty, guilt-free indulgence!
PrintChocolate Zucchini Muffins – Gluten Free Recipe
These Chocolate Zucchini Muffins are a delicious and healthy gluten-free treat, combining moist shredded zucchini with rich cocoa and chocolate chips. Perfect for breakfast or a snack, they’re naturally sweetened with maple syrup and made with wholesome ingredients like almond flour and almond butter, offering a satisfying chocolate flavor without refined sugars or gluten.
- Prep Time: 15 minutes
- Cook Time: 22-25 minutes
- Total Time: 37-40 minutes
- Yield: 12 muffins 1x
- Category: Breakfast, Snack, Dessert
- Method: Baking
- Cuisine: American
- Diet: Gluten Free
Ingredients
Dry Ingredients
- 1 1/4 cups blanched almond flour
- 1/3 cup unsweetened cocoa powder
- 1 teaspoon baking soda
- 1/2 teaspoon kosher salt
Wet Ingredients
- 1 large egg, lightly whisked
- 1/3 cup maple syrup
- 1/4 cup unsweetened applesauce
- 1/4 cup creamy almond butter
- 1/4 cup non-dairy milk (such as almond or coconut milk)
- 1 tablespoon olive oil or coconut oil
- 1 teaspoon vanilla extract
Additional Ingredients
- 1 cup shredded zucchini (water squeezed out)
- 2/3 cup chocolate chips, plus more for topping
Instructions
- Preheat Oven and Prepare Pan: Preheat your oven to 400°F (200°C) and line a 12-cup muffin pan with muffin liners. This ensures the muffins do not stick and bake evenly.
- Prepare Zucchini: Shred the zucchini using a box grater. Place the shredded zucchini in a clean kitchen towel and wring out as much excess water as possible. This step prevents soggy muffins.
- Mix Dry Ingredients: In a medium bowl, combine the almond flour, cocoa powder, baking soda, and kosher salt. Stir well to evenly distribute all dry components.
- Mix Wet Ingredients: In a separate bowl, whisk together the egg, maple syrup, applesauce, almond butter, non-dairy milk, olive or coconut oil, and vanilla extract until smooth and fully combined.
- Combine Mixtures: Pour the wet ingredients into the dry ingredients and mix until just combined. Then gently fold in the shredded zucchini and chocolate chips, ensuring they are evenly incorporated.
- Fill Muffin Pan: Divide the batter evenly among the 12 muffin cups. Optionally, sprinkle extra chocolate chips on top for an extra chocolatey finish.
- Bake Muffins: Bake in the preheated oven for 22 to 25 minutes or until a toothpick inserted in the center comes out clean or with a few moist crumbs.
- Cool and Serve: Remove the muffins from the oven and allow them to cool in the pan for about 5 minutes, then transfer to a wire rack. Enjoy warm or at room temperature.
Notes
- Ensure to squeeze out excess moisture from the zucchini to prevent the muffins from becoming too wet.
- Almond flour is naturally gluten-free, but verify labels if you have severe gluten intolerance or celiac disease.
- You can substitute non-dairy milk with any milk of choice if not strictly dairy-free.
- For a nut-free version, consider swapping almond flour and almond butter with suitable alternatives like oat flour and sunflower seed butter.
- Store muffins in an airtight container at room temperature for up to 3 days or refrigerate for up to a week.
- Freezing the muffins is possible; wrap individually and freeze for up to 3 months.
Nutrition
- Serving Size: 1 muffin
- Calories: 180 kcal
- Sugar: 9 g
- Sodium: 140 mg
- Fat: 13 g
- Saturated Fat: 2.5 g
- Unsaturated Fat: 10 g
- Trans Fat: 0 g
- Carbohydrates: 15 g
- Fiber: 3 g
- Protein: 5 g
- Cholesterol: 30 mg
Keywords: Chocolate Zucchini Muffins, Gluten Free Muffins, Healthy Chocolate Muffins, Almond Flour Muffins, Dairy-Free, Nutritious Snack